Solyc08g013970

Description : Disease resistance protein (AHRD V3.3 *** W9RZV6_9ROSA)

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g013970
Cluster	HCCA clusters: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
Glyma.12G218500	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
MA_10435995g0040	No alias	(at4g27190 : 188.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
PSME_00004008-RA	No alias	(at4g27220 : 168.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
PSME_00037099-RA	No alias	(at4g26090 : 230.0) Encodes a plasma membrane protein...	0.03	Orthogroups_2024-Update
Potri.011G124100	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Potri.T026800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Sopen08g004810	No alias	NB-ARC domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0016289	CoA hydrolase activity	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	13	247

External Links

No external refs found!