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  5. LOC_Os06g02090

LOC_Os06g02090


Description : expressed protein


Gene families : OG_42_0000176 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g02090
Cluster HCCA clusters: cluster_0080

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G176303 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.17G071500 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.02 Orthogroups_2024-Update
HORVU0Hr1G004610.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G059580.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G113560.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g18540 No alias hAT dimerisation domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g21740 No alias expressed protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR025398 DUF4371 217 267
IPR008906 HATC_C_dom 546 606
No external refs found!