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  5. LOC_Os06g02250

LOC_Os06g02250


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g02250
Cluster HCCA clusters: cluster_0100

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56520 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Bradi4g36210 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Brara.C01651.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.15G025500 No alias myb domain protein 26 0.02 Orthogroups_2024-Update
HORVU4Hr1G023510.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g29614 No alias myb-like DNA-binding domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os07g37210 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G180800 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
Potri.019G050900 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Seita.3G232500.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Seita.4G086300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G290600.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.03 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G034500.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Solyc01g005660 No alias R2R3MYB transcription factor 5 0.02 Orthogroups_2024-Update
Solyc02g079280 No alias MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) 0.02 Orthogroups_2024-Update
Solyc02g089190 No alias R2R3MYB transcription factor 29 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 113
IPR001005 SANT/Myb 15 62
No external refs found!