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  5. LOC_Os06g03540

LOC_Os06g03540


Description : oligopeptide transporter, putative, expressed


Gene families : OG_42_0000467 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g03540
Cluster HCCA clusters: cluster_0100

Target Alias Description ECC score Gene Family Method Actions
A4A49_22968 No alias oligopeptide transporter 1 0.02 Orthogroups_2024-Update
At5g53520 No alias Oligopeptide transporter 8... 0.02 Orthogroups_2024-Update
Bradi3g52290 No alias oligopeptide transporter 4 0.02 Orthogroups_2024-Update
Glyma.03G139100 No alias oligopeptide transporter 5 0.02 Orthogroups_2024-Update
Glyma.04G233000 No alias oligopeptide transporter 1 0.02 Orthogroups_2024-Update
Glyma.14G012400 No alias oligopeptide transporter 1 0.02 Orthogroups_2024-Update
Kfl00583_0020 kfl00583_0020_v1.1 (at5g64410 : 861.0) oligopeptide transporter;... 0.01 Orthogroups_2024-Update
PSME_00005996-RA No alias (at4g16370 : 1181.0) Encodes an oligopeptide transporter... 0.02 Orthogroups_2024-Update
PSME_00027439-RA No alias (at4g10770 : 1134.0) oligopeptide transporter;... 0.02 Orthogroups_2024-Update
Potri.007G056900 No alias oligopeptide transporter 7 0.02 Orthogroups_2024-Update
Sobic.001G087700.1 No alias oligopeptide transporter *(OPT) 0.02 Orthogroups_2024-Update
Sobic.004G273500.1 No alias oligopeptide transporter *(OPT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 67 723
No external refs found!