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  5. LOC_Os06g04540

LOC_Os06g04540


Description : DNA binding protein, putative, expressed


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g04540
Cluster HCCA clusters: cluster_0129

Target Alias Description ECC score Gene Family Method Actions
A4A49_14176 No alias at-hook motif nuclear-localized protein 26 0.02 Orthogroups_2024-Update
A4A49_28834 No alias at-hook motif nuclear-localized protein 22 0.03 Orthogroups_2024-Update
At2g42940 No alias AT-hook motif nuclear-localized protein... 0.03 Orthogroups_2024-Update
At3g55560 No alias AT-hook motif nuclear-localized protein... 0.02 Orthogroups_2024-Update
Brara.A00905.1 No alias AHL clade-A transcription factor 0.02 Orthogroups_2024-Update
Glyma.10G167100 No alias AT-hook motif nuclear-localized protein 20 0.02 Orthogroups_2024-Update
Glyma.11G221200 No alias AT-hook protein of GA feedback 2 0.03 Orthogroups_2024-Update
Glyma.18G036200 No alias AT-hook protein of GA feedback 2 0.02 Orthogroups_2024-Update
HORVU6Hr1G091740.1 No alias AHL clade-A transcription factor 0.02 Orthogroups_2024-Update
MA_41289g0010 No alias (at4g17800 : 192.0) Predicted AT-hook DNA-binding family... 0.03 Orthogroups_2024-Update
MA_97756g0010 No alias (at2g45430 : 186.0) Encodes a nuclear localized AT hook... 0.03 Orthogroups_2024-Update
Mp7g18120.1 No alias AT-hook motif nuclear-localized protein 20... 0.02 Orthogroups_2024-Update
Potri.001G142800 No alias Predicted AT-hook DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.002G003800 No alias Predicted AT-hook DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.002G149300 No alias AT-hook motif nuclear-localized protein 22 0.02 Orthogroups_2024-Update
Potri.003G116900 No alias Predicted AT-hook DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.014G070800 No alias AT-hook motif nuclear-localized protein 22 0.02 Orthogroups_2024-Update
Seita.7G218100.1 No alias AHL clade-A transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G134900.5 No alias AHL clade-A transcription factor 0.01 Orthogroups_2024-Update
Solyc07g056300 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen09g032560 No alias Domain of unknown function (DUF296) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0010923 negative regulation of phosphatase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0031400 negative regulation of protein modification process IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0035305 negative regulation of dephosphorylation IEP Predicted GO
BP GO:0035308 negative regulation of protein dephosphorylation IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0045936 negative regulation of phosphate metabolic process IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 139 252
No external refs found!