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  5. LOC_Os06g06160

LOC_Os06g06160


Description : IQ calmodulin-binding motif domain containing protein, expressed


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g06160
Cluster HCCA clusters: cluster_0113

Target Alias Description ECC score Gene Family Method Actions
410247 No alias IQ-domain 19 0.02 Orthogroups_2024-Update
67789 No alias IQ-domain 2 0.02 Orthogroups_2024-Update
Bradi1g49070 No alias IQ-domain 9 0.01 Orthogroups_2024-Update
Brara.B00074.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.06G232400 No alias IQ-domain 10 0.02 Orthogroups_2024-Update
Glyma.08G191400 No alias IQ-domain 8 0.02 Orthogroups_2024-Update
HORVU3Hr1G117830.2 No alias Unknown function 0.01 Orthogroups_2024-Update
MA_81306g0020 No alias (at5g03040 : 211.0) IQ-domain 2 (iqd2); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Sobic.003G346000.5 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G174900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G043600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!