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  5. LOC_Os06g06350

LOC_Os06g06350


Description : AMP-binding enzyme, putative, expressed


Gene families : OG_42_0000553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000553_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os06g06350
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
Brara.I01297.1 No alias EC_6.2 ligase forming carbon-sulfur bond 0.02 Orthogroups_2024-Update
GRMZM2G152127 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
GRMZM2G176546 No alias long-chain acyl-CoA synthetase 6 0.02 Orthogroups_2024-Update
GRMZM5G861300 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.07G161900 No alias long-chain acyl-CoA synthetase 2 0.03 Orthogroups_2024-Update
HORVU1Hr1G016200.16 No alias EC_6.2 ligase forming carbon-sulfur bond 0.03 Orthogroups_2024-Update
HORVU5Hr1G099350.1 No alias EC_6.2 ligase forming carbon-sulfur bond 0.03 Orthogroups_2024-Update
LOC_Os11g35400 No alias AMP-binding enzyme, putative, expressed 0.03 Orthogroups_2024-Update
Seita.8G153500.1 No alias EC_6.2 ligase forming carbon-sulfur bond 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 43 518
No external refs found!