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  5. LOC_Os06g06440

LOC_Os06g06440


Description : ABC transporter, ATP-binding protein, putative, expressed


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g06440
Cluster HCCA clusters: cluster_0034

Target Alias Description ECC score Gene Family Method Actions
267271 No alias multidrug resistance-associated protein 5 0.02 Orthogroups_2024-Update
81581 No alias multidrug resistance-associated protein 2 0.02 Orthogroups_2024-Update
At3g59140 No alias ABC transporter C family member 10... 0.03 Orthogroups_2024-Update
Brara.E00958.1 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Brara.G01873.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Brara.I04064.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.I04331.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
GRMZM2G111903 No alias multidrug resistance-associated protein 14 0.03 Orthogroups_2024-Update
Glyma.10G019000 No alias multidrug resistance-associated protein 4 0.03 Orthogroups_2024-Update
HORVU2Hr1G103620.5 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.03 Orthogroups_2024-Update
PSME_00003012-RA No alias (at2g34660 : 1782.0) encodes a multidrug... 0.02 Orthogroups_2024-Update
Seita.7G043600.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Solyc09g064440 No alias ABC transporter family protein (AHRD V3.3 *** A0A097P9R4_HEVBR) 0.02 Orthogroups_2024-Update
Sopen09g029840 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen11g025460 No alias ABC transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 303 570
IPR011527 ABC1_TM_dom 920 1167
IPR003439 ABC_transporter-like 1246 1394
IPR003439 ABC_transporter-like 635 769
No external refs found!