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  5. LOC_Os06g07400

LOC_Os06g07400


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g07400
Cluster HCCA clusters: cluster_0013

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358542 No alias Function unknown 0.01 Orthogroups_2024-Update
HORVU4Hr1G045110.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00569_0100 kfl00569_0100_v1.1 (p31843|rrpo_oenbe : 135.0) RNA-directed DNA polymerase... 0.02 Orthogroups_2024-Update
Kfl00590_0100 kfl00590_0100_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Sopen01g012600 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen11g009630 No alias Integrase core domain 0.02 Orthogroups_2024-Update
Sopen11g009960 No alias Retrotransposon gag protein 0.02 Orthogroups_2024-Update
Sopen12g011680 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!