LOC_Os06g08340

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os06g08340
Cluster	HCCA clusters: cluster_0114

Target	Alias	Description	ECC score	Gene Family Method
68470	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
73155	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
80895	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
92334	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.02	Orthogroups_2024-Update
A4A49_21042	No alias	ethylene-responsive transcription factor 4	0.02	Orthogroups_2024-Update
At1g21910	No alias	DREB26 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Q9]	0.02	Orthogroups_2024-Update
At1g68550	No alias	Ethylene-responsive transcription factor ERF118...	0.05	Orthogroups_2024-Update
At2g36450	No alias	Ethylene-responsive transcription factor ERF024...	0.03	Orthogroups_2024-Update
At2g40220	No alias	Ethylene-responsive transcription factor ABI4...	0.02	Orthogroups_2024-Update
At4g17500	No alias	Ethylene-responsive transcription factor 1A...	0.03	Orthogroups_2024-Update
At4g39780	No alias	Ethylene-responsive transcription factor ERF060...	0.03	Orthogroups_2024-Update
At5g13910	No alias	LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]	0.02	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.02	Orthogroups_2024-Update
Bradi1g00666	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Bradi1g38110	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g52380	No alias	ERF domain protein 12	0.02	Orthogroups_2024-Update
Bradi5g17620	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi5g17640	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Brara.A01788.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.A01860.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.A02664.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.B02236.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.C01790.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.E00876.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.F01050.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.H02380.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.02	Orthogroups_2024-Update
Brara.I00546.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.J02660.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.K01035.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.02	Orthogroups_2024-Update
Glyma.01G206600	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Glyma.03G111700	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.03G112000	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.04G147500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.04G201700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.04G217400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.05G092800	No alias	cooperatively regulated by ethylene and jasmonate 1	0.02	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.07G114000	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.08G320700	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.12G226600	No alias	ethylene responsive element binding factor 4	0.02	Orthogroups_2024-Update
Glyma.13G122500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.14G057900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.18G091600	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.18G252300	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.18G252400	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.19G163900	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
HORVU1Hr1G082310.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G071270.4	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
HORVU4Hr1G079630.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g60120	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g28350	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10433310g0010	No alias	(at5g11590 : 108.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_12547g0010	No alias	(at5g25810 : 85.9) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_40338g0010	No alias	(at1g21910 : 84.7) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_5629699g0010	No alias	(at5g21960 : 89.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_65190g0010	No alias	(at5g19790 : 91.3) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_8384767g0010	No alias	(at1g33760 : 124.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_8552524g0010	No alias	(q9lw50\|erf2_nicsy : 135.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_900190g0010	No alias	(at1g01250 : 124.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_9294379g0010	No alias	(at5g11590 : 120.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00008862-RA	No alias	(q6k7e6\|erf1_orysa : 93.6) Ethylene-responsive...	0.03	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G315300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.002G153500	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.003G121200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.004G047500	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Potri.004G187001	No alias	C-repeat/DRE binding factor 2	0.02	Orthogroups_2024-Update
Potri.013G056700	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.014G046700	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.018G021900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s23_8V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s487_24V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G187800.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G230500.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Seita.2G364700.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Seita.2G430400.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Seita.3G278500.1	No alias	transcription factor *(ABI4) & subgroup ERF-IV/DREB2...	0.03	Orthogroups_2024-Update
Seita.4G051200.1	No alias	subgroup ERF-V transcription factor	0.04	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.6G181700.1	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Seita.7G109400.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.9G323300.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.9G455400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G531100.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G442100.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Solyc01g108240	No alias	Ethylene Response Factor D.3	0.04	Orthogroups_2024-Update
Solyc03g026280	No alias	CBF	0.02	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc06g082590	No alias	DNA-binding protein Pti6	0.03	Orthogroups_2024-Update
Solyc09g089920	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen06g025620	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	55

External Links

No external refs found!

LOC_Os06g08340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation