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  5. LOC_Os06g09390

LOC_Os06g09390


Description : AP2 domain containing protein, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g09390
Cluster HCCA clusters: cluster_0079

Target Alias Description ECC score Gene Family Method Actions
73155 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
A4A49_39586 No alias ethylene-responsive transcription factor erf106 0.03 Orthogroups_2024-Update
A4A49_40092 No alias ethylene-responsive transcription factor crf2 0.03 Orthogroups_2024-Update
At2g23340 No alias Ethylene-responsive transcription factor ERF008... 0.02 Orthogroups_2024-Update
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.03 Orthogroups_2024-Update
At3g57600 No alias Dehydration-responsive element-binding protein 2F... 0.03 Orthogroups_2024-Update
At4g31060 No alias Ethylene-responsive transcription factor ERF015... 0.02 Orthogroups_2024-Update
At5g07580 No alias Ethylene-responsive transcription factor ERF106... 0.02 Orthogroups_2024-Update
Bradi1g71740 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g29960 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g49810 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00415.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.C01524.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.C04525.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.D01886.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.F02347.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Brara.G00808.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.H00115.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.H01496.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.I04175.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.K00718.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G119865 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G156737 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G049800 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Glyma.06G301300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G195900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G018240.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU0Hr1G030500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G103660.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G062940.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
MA_1037g0020 No alias (at1g74930 : 134.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_166248g0020 No alias (at4g17500 : 128.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
MA_16778g0010 No alias (at5g05410 : 117.0) Encodes a transcription factor that... 0.02 Orthogroups_2024-Update
MA_2446g0010 No alias (at2g20880 : 136.0) Integrase-type DNA-binding... 0.02 Orthogroups_2024-Update
MA_28894g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_502153g0010 No alias (at5g44210 : 94.4) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00008897-RA No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00037532-RA No alias (at5g61890 : 129.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00046682-RA No alias (at3g16770 : 96.3) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
Potri.014G055700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s25_13V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Pp1s340_16V6 No alias ethylene-responsive transcription 0.02 Orthogroups_2024-Update
Pp1s67_144V6 No alias ap2 domain transcription factor 0.02 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G289200.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Seita.5G115000.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.01 Orthogroups_2024-Update
Seita.5G348000.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.7G188700.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G481300.1 No alias subgroup ERF-VII transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G115400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G297100.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Sobic.010G164800.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Solyc03g093550 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc08g082210 No alias AP2/EREBP transcription factor 0.02 Orthogroups_2024-Update
Sopen03g024370 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen06g018310 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen06g022520 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 115 163
No external refs found!