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  5. LOC_Os06g09717

LOC_Os06g09717


Description : ethylene-responsive transcription factor, putative, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g09717
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
68470 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
80895 No alias ethylene responsive element binding factor 2 0.02 Orthogroups_2024-Update
92334 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.02 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.02 Orthogroups_2024-Update
At1g28370 No alias ERF domain protein 11 [Source:TAIR;Acc:AT1G28370] 0.02 Orthogroups_2024-Update
At1g74930 No alias Ethylene-responsive transcription factor ERF018... 0.03 Orthogroups_2024-Update
At2g36450 No alias Ethylene-responsive transcription factor ERF024... 0.03 Orthogroups_2024-Update
At4g17500 No alias Ethylene-responsive transcription factor 1A... 0.03 Orthogroups_2024-Update
At5g13330 No alias Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8] 0.03 Orthogroups_2024-Update
At5g19790 No alias Ethylene-responsive transcription factor RAP2-11... 0.03 Orthogroups_2024-Update
At5g43410 No alias Ethylene-responsive transcription factor ERF096... 0.03 Orthogroups_2024-Update
At5g61600 No alias Ethylene-responsive transcription factor ERF104... 0.02 Orthogroups_2024-Update
Bradi1g46690 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Brara.G01052.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H01576.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.K00687.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Glyma.06G290000 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Glyma.08G320700 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Glyma.09G147200 No alias C-repeat-binding factor 4 0.03 Orthogroups_2024-Update
Glyma.10G099800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G079100 No alias ethylene responsive element binding factor 2 0.02 Orthogroups_2024-Update
HORVU1Hr1G070410.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G071270.4 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G062380.3 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g32140 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_2040g0010 No alias (at5g65130 : 90.5) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00050134-RA No alias (at5g19790 : 92.0) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
Potri.001G315300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G065600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G080600 No alias ethylene responsive element binding factor 6 0.03 Orthogroups_2024-Update
Potri.004G051800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G138900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G163400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G072400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G134000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G047000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Pp1s133_11V6 No alias c-repeat binding factor 4 0.02 Orthogroups_2024-Update
Pp1s293_53V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s487_24V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G027100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.1G174700.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.1G248300.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Seita.2G112200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G138200.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.2G215500.1 No alias subgroup ERF-VII transcription factor & transcription... 0.05 Orthogroups_2024-Update
Seita.3G281000.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G415600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sobic.003G148600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.04 Orthogroups_2024-Update
Sobic.004G295500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G296900.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G167900.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Solyc01g009440 No alias C-repeat binding factor 1 (AHRD V3.3 *** A0A077B5X4_9ROSI) 0.02 Orthogroups_2024-Update
Solyc03g093550 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc09g066360 No alias Ethylene Response Factor C.3 0.02 Orthogroups_2024-Update
Solyc09g091950 No alias Ethylene-responsive transcription factor ERF062 (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g049560 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g027380 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen03g002330 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen04g024720 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen10g028030 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 10 54
No external refs found!