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  5. LOC_Os06g09880

LOC_Os06g09880


Description : EMB1270, putative, expressed


Gene families : OG_42_0005523 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g09880
Cluster HCCA clusters: cluster_0015


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Predicted GO
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 356 387
IPR002885 Pentatricopeptide_repeat 783 811
IPR002885 Pentatricopeptide_repeat 1099 1127
IPR002885 Pentatricopeptide_repeat 220 264
IPR002885 Pentatricopeptide_repeat 396 443
IPR002885 Pentatricopeptide_repeat 838 896
IPR002885 Pentatricopeptide_repeat 909 967
IPR002885 Pentatricopeptide_repeat 279 338
IPR002885 Pentatricopeptide_repeat 1013 1072
IPR002885 Pentatricopeptide_repeat 453 512
No external refs found!