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  5. LOC_Os06g10410

LOC_Os06g10410


Description : uncharacterized mscS family protein, putative, expressed


Gene families : OG_42_0000648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g10410
Cluster HCCA clusters: cluster_0025

Target Alias Description ECC score Gene Family Method Actions
A4A49_27673 No alias mechanosensitive ion channel protein 10 0.02 Orthogroups_2024-Update
Bradi3g51250 No alias mechanosensitive channel of small conductance-like 5 0.02 Orthogroups_2024-Update
Brara.B00442.1 No alias mechanosensitive ion channel *(MSL) 0.02 Orthogroups_2024-Update
Brara.H00129.1 No alias mechanosensitive ion channel *(MSL) 0.03 Orthogroups_2024-Update
Glyma.09G067800 No alias mechanosensitive channel of small conductance-like 10 0.02 Orthogroups_2024-Update
HORVU4Hr1G083980.5 No alias mechanosensitive ion channel *(MSL) 0.03 Orthogroups_2024-Update
MA_10428116g0010 No alias (at5g12080 : 486.0) mechanosensitive channel of small... 0.03 Orthogroups_2024-Update
PSME_00031352-RA No alias (at1g78610 : 734.0) mechanosensitive channel of small... 0.03 Orthogroups_2024-Update
PSME_00046328-RA No alias (at3g14810 : 231.0) mechanosensitive channel of small... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006685 MscS_channel 514 718
No external refs found!