LOC_Os06g10780

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os06g10780
Cluster	HCCA clusters: cluster_0095

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
At3g57600	No alias	Dehydration-responsive element-binding protein 2F...	0.02	Orthogroups_2024-Update
Bradi1g33550	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Bradi2g57201	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g49810	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g35580	No alias	C-repeat/DRE binding factor 1	0.03	Orthogroups_2024-Update
Bradi4g35600	No alias	C-repeat/DRE binding factor 1	0.03	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.D01390.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Brara.E00471.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Glyma.03G112000	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.03G112100	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.13G122600	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.15G079100	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
Glyma.18G144700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
MA_10430769g0010	No alias	(at5g25810 : 105.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00026873-RA	No alias	(at5g11590 : 114.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Pp1s138_190V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s2_410V6	No alias	ap2 erf domain-containing transcription factor	0.01	Orthogroups_2024-Update
Seita.1G174700.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.2G230500.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.7G098100.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.001G481600.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G100500.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G295500.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Sobic.005G087600.2	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Solyc04g072900	No alias	dehydration-responsive element binding protein 3	0.02	Orthogroups_2024-Update
Solyc05g013540	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen00g003270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g026100	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
BP	GO:0016311	dephosphorylation	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
CC	GO:0030117	membrane coat	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
CC	GO:0044431	Golgi apparatus part	IEP	Predicted GO
CC	GO:0044433	cytoplasmic vesicle part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	75	123

External Links

No external refs found!

LOC_Os06g10780

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation