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  5. LOC_Os06g11410

LOC_Os06g11410


Description : cyclin, putative, expressed


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g11410
Cluster HCCA clusters: cluster_0065

Target Alias Description ECC score Gene Family Method Actions
15078 No alias CYCLIN D3;3 0.02 Orthogroups_2024-Update
Glyma.08G280600 No alias CYCLIN D4;1 0.02 Orthogroups_2024-Update
HORVU2Hr1G030170.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G033350.3 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
LOC_Os12g39830 No alias cyclin, putative, expressed 0.03 Orthogroups_2024-Update
Potri.011G040900 No alias Cyclin D6;1 0.02 Orthogroups_2024-Update
Seita.2G349600.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Sobic.002G190700.2 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032947 protein-containing complex scaffold activity IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 63 189
IPR004367 Cyclin_C-dom 192 285
No external refs found!