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LOC_Os06g12250


Description : sphingolipid C4-hydroxylase SUR2, putative, expressed


Gene families : OG_42_0001180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g12250
Cluster HCCA clusters: cluster_0124

Target Alias Description ECC score Gene Family Method Actions
A4A49_26033 No alias sphinganine c4-monooxygenase 1 0.03 Orthogroups_2024-Update
Sobic.004G008800.1 No alias sphingobase hydroxylase & EC_1.14 oxidoreductase acting... 0.02 Orthogroups_2024-Update
Sobic.004G008900.1 No alias sphingobase hydroxylase & EC_1.14 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Sobic.004G237600.1 No alias sphingobase hydroxylase & EC_1.14 oxidoreductase acting... 0.04 Orthogroups_2024-Update
Sobic.010G092200.1 No alias sphingobase hydroxylase & EC_1.14 oxidoreductase acting... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
BP GO:0008610 lipid biosynthetic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 98 234
No external refs found!