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  5. LOC_Os06g12320

LOC_Os06g12320


Description : transmembrane amino acid transporter protein, putative, expressed


Gene families : OG_42_0000219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g12320
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
A4A49_05485 No alias amino acid transporter ant1 0.03 Orthogroups_2024-Update
At3g28960 No alias Amino acid transporter AVT1I... 0.05 Orthogroups_2024-Update
At5g02180 No alias Amino acid transporter AVT1D... 0.02 Orthogroups_2024-Update
Brara.J02897.1 No alias solute transporter *(AAAP) 0.04 Orthogroups_2024-Update
GRMZM2G108597 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Glyma.11G166500 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Glyma.19G130500 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Potri.002G233200 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Potri.014G146700 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Seita.7G124300.1 No alias solute transporter *(AAAP) 0.04 Orthogroups_2024-Update
Sopen10g034270 No alias Transmembrane amino acid transporter protein 0.02 Orthogroups_2024-Update
evm.model.tig00000430.19 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00020614.122 No alias (at5g02180 : 103.0) Transmembrane amino acid transporter... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 10 404
No external refs found!