Description : pentatricopeptide, putative, expressed
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os06g12510 | |
Cluster | HCCA clusters: cluster_0003 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
45004 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
A4A49_00959 | No alias | pentatricopeptide repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
A4A49_23672 | No alias | pentatricopeptide repeat-containing protein, mitochondrial | 0.02 | Orthogroups_2024-Update | |
At1g03540 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.02 | Orthogroups_2024-Update | |
Bradi1g20570 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G111780 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G121579 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.04G203500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.10G277600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.13G313300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G357000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.20G154600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.20G155800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G019670.6 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G113330.1 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
LOC_Os07g39090 | No alias | pentatricopeptide repeat domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
LOC_Os07g39910 | No alias | pentatricopeptide repeat domain containing protein,... | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g29360 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_168311g0010 | No alias | (at4g02750 : 377.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00018595-RA | No alias | (at1g11290 : 678.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
PSME_00022688-RA | No alias | (at3g46790 : 282.0) Encodes a member of a PCMP (plant... | 0.02 | Orthogroups_2024-Update | |
PSME_00033049-RA | No alias | (at1g11290 : 583.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
PSME_00034399-RA | No alias | (at4g33170 : 426.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00044871-RA | No alias | (at2g39620 : 426.0) Pentatricopeptide repeat (PPR)... | 0.01 | Orthogroups_2024-Update | |
Potri.012G080200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.014G097000 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
Seita.9G162400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 226 | 274 |
IPR002885 | Pentatricopeptide_repeat | 62 | 111 |
IPR002885 | Pentatricopeptide_repeat | 329 | 375 |
IPR002885 | Pentatricopeptide_repeat | 396 | 428 |
IPR002885 | Pentatricopeptide_repeat | 167 | 193 |
IPR002885 | Pentatricopeptide_repeat | 303 | 327 |
IPR002885 | Pentatricopeptide_repeat | 139 | 160 |
No external refs found! |