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Description : PHD finger family protein (AHRD V3.3 *** AT3G08020.1)
Gene families : OG_42_0003408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003408_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc01g087420 | |
| Cluster | HCCA clusters: Cluster_178 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.I03530.1 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000313 | organellar ribosome | IEP | Predicted GO |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
| CC | GO:0005761 | mitochondrial ribosome | IEP | Predicted GO |
| BP | GO:0006528 | asparagine metabolic process | IEP | Predicted GO |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
| MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0016229 | steroid dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
| MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
| BP | GO:0030258 | lipid modification | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
| MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0046834 | lipid phosphorylation | IEP | Predicted GO |
| BP | GO:0046854 | phosphatidylinositol phosphorylation | IEP | Predicted GO |
| CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |