1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g15400

LOC_Os06g15400


Description : expressed protein


Gene families : OG_42_0000658 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g15400
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
A4A49_07707 No alias protein curvature thylakoid 1a, chloroplastic 0.03 Orthogroups_2024-Update
At1g52220 No alias CURT1C [Source:UniProtKB/TrEMBL;Acc:A0A178WBD4] 0.03 Orthogroups_2024-Update
Bradi1g43950 No alias Function unknown 0.06 Orthogroups_2024-Update
Bradi2g50526 No alias Function unknown 0.02 Orthogroups_2024-Update
Brara.D02820.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
Brara.E00101.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
Brara.F00206.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.05 Orthogroups_2024-Update
GRMZM2G371795 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.07G019400 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.07G049000 No alias photosystem I P subunit 0.03 Orthogroups_2024-Update
Glyma.07G060700 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.08G204600 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.16G029300 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU1Hr1G051700.6 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
HORVU6Hr1G073100.4 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.05 Orthogroups_2024-Update
HORVU7Hr1G042160.3 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.05 Orthogroups_2024-Update
Kfl00792_0030 kfl00792_0030_v1.1 (at1g52220 : 111.0) FUNCTIONS IN: molecular_function... 0.07 Orthogroups_2024-Update
MA_90810g0010 No alias (at4g01150 : 117.0) unknown protein; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 Orthogroups_2024-Update
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 Orthogroups_2024-Update
Potri.003G052200 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.014G093900 No alias Function unknown 0.03 Orthogroups_2024-Update
Pp1s15_328V6 No alias Thylakoid membrane phosphoprotein 14 kDa, chloroplast... 0.02 Orthogroups_2024-Update
Pp1s212_34V6 No alias threonine endopeptidase 0.02 Orthogroups_2024-Update
Pp1s49_42V6 No alias thylakoid membrane phosphoprotein 14 chloroplast 0.04 Orthogroups_2024-Update
Pp1s98_136V6 No alias F9I5.10; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s9_38V6 No alias threonine endopeptidase 0.03 Orthogroups_2024-Update
Seita.1G308600.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.04 Orthogroups_2024-Update
Seita.2G308600.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.09 Orthogroups_2024-Update
Seita.4G117700.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.06 Orthogroups_2024-Update
Seita.5G326400.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.02 Orthogroups_2024-Update
Sobic.002G297300.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.08 Orthogroups_2024-Update
Sobic.003G303700.2 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.05 Orthogroups_2024-Update
Sobic.004G249800.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.06 Orthogroups_2024-Update
Sobic.004G305800.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
Sobic.010G109500.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.06 Orthogroups_2024-Update
Solyc10g005050 No alias Thylakoid membrane phosphoprotein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Sopen01g039180 No alias CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 0.02 Orthogroups_2024-Update
Sopen06g024890 No alias CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 0.02 Orthogroups_2024-Update
Sopen10g001080 No alias CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 0.02 Orthogroups_2024-Update
evm.model.tig00000849.28 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR025564 CAAD_dom 72 154
No external refs found!