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  5. LOC_Os06g16160

LOC_Os06g16160


Description : expressed protein


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g16160
Cluster HCCA clusters: cluster_0026

Target Alias Description ECC score Gene Family Method Actions
A4A49_04728 No alias protein trichome birefringence-like 23 0.02 Orthogroups_2024-Update
A4A49_29717 No alias protein trichome birefringence-like 19 0.03 Orthogroups_2024-Update
At4g01080 No alias Protein trichome birefringence-like 26... 0.02 Orthogroups_2024-Update
Bradi1g43730 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.02 Orthogroups_2024-Update
GRMZM2G131152 No alias TRICHOME BIREFRINGENCE-LIKE 26 0.03 Orthogroups_2024-Update
Potri.011G144100 No alias TRICHOME BIREFRINGENCE-LIKE 22 0.02 Orthogroups_2024-Update
Seita.3G077200.1 No alias mannan O-acetyltransferase *(MOAT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 70 122
IPR025846 PMR5_N_dom 469 521
IPR026057 PC-Esterase 527 819
IPR026057 PC-Esterase 123 402
No external refs found!