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  5. LOC_Os06g18850

LOC_Os06g18850


Description : cadmium tolerance factor, putative, expressed


Gene families : OG_42_0000570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g18850
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G089890.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G021190.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G043950.7 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 780 889
IPR026961 PGG_dom 276 387
IPR026961 PGG_dom 964 1076
IPR026961 PGG_dom 609 719
IPR026961 PGG_dom 93 202
No external refs found!