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  5. LOC_Os06g20120

LOC_Os06g20120


Description : CND41, chloroplast nucleoid DNA binding protein, putative, expressed


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g20120
Cluster HCCA clusters: cluster_0133

Target Alias Description ECC score Gene Family Method Actions
A4A49_32144 No alias protein aspartic protease in guard cell 2 0.03 Orthogroups_2024-Update
Bradi1g46195 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Bradi3g53620 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
Brara.E02347.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Glyma.08G220600 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
Glyma.08G321400 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
LOC_Os05g09530 No alias expressed protein 0.03 Orthogroups_2024-Update
PSME_00014937-RA No alias (at5g10770 : 295.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00048209-RA No alias (gnl|cdd|38754 : 99.8) no description available &... 0.03 Orthogroups_2024-Update
Potri.001G041700 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Seita.6G178600.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Seita.8G242200.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
Sobic.007G154100.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
Solyc08g005830 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc09g008600 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 332 495
IPR032861 TAXi_N 146 305
No external refs found!