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  5. LOC_Os06g20320

LOC_Os06g20320


Description : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed


Gene families : OG_42_0005981 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g20320
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
Bradi1g42820 No alias trigger factor type chaperone family protein 0.04 Orthogroups_2024-Update
Cre01.g001750 No alias trigger factor type chaperone family protein 0.02 Orthogroups_2024-Update
Sobic.008G021700.1 No alias nascent polypeptide chaperone *(TIG) 0.03 Orthogroups_2024-Update
Solyc07g064950 No alias trigger factor type chaperone family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen07g033150 No alias Bacterial trigger factor protein (TF) C-terminus 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA InterProScan predictions
BP GO:0015031 protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR008880 Trigger_fac_C 369 528
IPR008881 Trigger_fac_ribosome-bd_bac 88 239
No external refs found!