Description : retrotransposon protein, putative, unclassified, expressed
Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os06g22500 | |
Cluster | HCCA clusters: cluster_0007 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os01g19460 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g44830 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.03 | Orthogroups_2024-Update | |
Seita.3G310800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.6G097900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.6G118500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Solyc02g044010 | No alias | LOW QUALITY:PIF1 helicase, putative (AHRD V3.3 *-*... | 0.03 | Orthogroups_2024-Update | |
Sopen11g011570 | No alias | PIF1-like helicase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEA | InterProScan predictions |
MF | GO:0003678 | DNA helicase activity | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003779 | actin binding | IEP | Predicted GO |
BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
BP | GO:0006479 | protein methylation | IEP | Predicted GO |
BP | GO:0006480 | N-terminal protein amino acid methylation | IEP | Predicted GO |
BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Predicted GO |
BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
BP | GO:0031365 | N-terminal protein amino acid modification | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0034311 | diol metabolic process | IEP | Predicted GO |
BP | GO:0034312 | diol biosynthetic process | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Predicted GO |
BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010285 | DNA_helicase_pif1-like | 18 | 153 |
No external refs found! |