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  5. LOC_Os06g22650

LOC_Os06g22650


Description : VHS and GAT domain containing protein, expressed


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g22650
Cluster HCCA clusters: cluster_0073

Target Alias Description ECC score Gene Family Method Actions
Bradi2g22420 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Brara.H01294.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Brara.K00689.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Glyma.09G278600 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Glyma.18G210100 No alias ENTH/VHS/GAT family protein 0.05 Orthogroups_2024-Update
HORVU7Hr1G025620.5 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
HORVU7Hr1G077230.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Potri.016G131900 No alias ENTH/VHS/GAT family protein 0.04 Orthogroups_2024-Update
Potri.018G039100 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Solyc09g014790 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc11g005460 No alias ENTH/VHS/GAT family protein (AHRD V3.3 *** AT5G63640.2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002014 VHS_dom 6 124
IPR004152 GAT_dom 195 269
No external refs found!