LOC_Os06g23650

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os06g23650
Cluster	HCCA clusters: cluster_0033

Target	Alias	Description	ECC score	Gene Family Method
71404	No alias	NAC 007	0.02	Orthogroups_2024-Update
A4A49_25058	No alias	nac domain-containing protein 86	0.03	Orthogroups_2024-Update
A4A49_25578	No alias	nac domain-containing protein 7	0.04	Orthogroups_2024-Update
A4A49_26375	No alias	protein sombrero	0.02	Orthogroups_2024-Update
At3g04060	No alias	NAC domain-containing protein 46...	0.02	Orthogroups_2024-Update
At4g35580	No alias	NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]	0.02	Orthogroups_2024-Update
At5g09330	No alias	NAC domain-containing protein 82...	0.03	Orthogroups_2024-Update
At5g18270	No alias	NAC domain-containing protein 87...	0.03	Orthogroups_2024-Update
Brara.A00921.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C04256.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.11G075400	No alias	vascular related NAC-domain protein 1	0.02	Orthogroups_2024-Update
Glyma.20G192300	No alias	NAC domain containing protein 50	0.02	Orthogroups_2024-Update
HORVU2Hr1G017350.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G126080.3	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G060800.3	No alias	NAC-type transcription factor	0.06	Orthogroups_2024-Update
LOC_Os02g42970	No alias	NAC domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g42630	No alias	No apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
Mp4g11910.1	No alias	transcription factor (NAC)	0.02	Orthogroups_2024-Update
PSME_00001691-RA	No alias	(at1g65910 : 202.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
PSME_00016378-RA	No alias	(at1g65910 : 260.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
Potri.005G058900	No alias	NAC domain containing protein 82	0.02	Orthogroups_2024-Update
Potri.009G161300	No alias	NTM1-like 8	0.02	Orthogroups_2024-Update
Potri.012G126500	No alias	NAC 007	0.02	Orthogroups_2024-Update
Potri.019G083600	No alias	vascular related NAC-domain protein 7	0.02	Orthogroups_2024-Update
Pp1s288_4V6	No alias	no apical meristem	0.03	Orthogroups_2024-Update
Pp1s73_182V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Seita.7G306500.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G279400.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc02g036430	No alias	NAC domain protein, (AHRD V3.3 *** A0A061EDT4_THECC)	0.02	Orthogroups_2024-Update
Solyc11g008000	No alias	NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0009611	response to wounding	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
BP	GO:0016052	carbohydrate catabolic process	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	24	150

External Links

No external refs found!

LOC_Os06g23650

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation