1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g023460

Solyc08g023460


Description : LEM3 (Ligand-effect modulator 3) family protein (AHRD V3.3 *** A0A072V9A6_MEDTR)


Gene families : OG_42_0000820 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000820_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g023460
Cluster HCCA clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
Pp1s84_127V6 No alias cell division control protein 50 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR005045 CDC50/LEM3_fam 71 335
No external refs found!