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  5. LOC_Os06g29994

LOC_Os06g29994


Description : MATE efflux family protein, putative, expressed


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g29994
Cluster HCCA clusters: cluster_0080

Target Alias Description ECC score Gene Family Method Actions
Brara.H02547.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Cre01.g027764 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.07G100100 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G084080.3 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
HORVU7Hr1G047080.11 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Potri.010G117000 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Seita.4G145800.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Sobic.010G256700.4 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 258 421
IPR002528 MATE_fam 37 196
No external refs found!