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LOC_Os06g30810


Description : OsMADS75 - MADS-box family gene with M-alpha type-box, expressed


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g30810
Cluster HCCA clusters: cluster_0057

Target Alias Description ECC score Gene Family Method Actions
A4A49_11564 No alias developmental protein sepallata 1 0.02 Orthogroups_2024-Update
A4A49_14436 No alias agamous-like mads-box protein agl11 0.02 Orthogroups_2024-Update
A4A49_26055 No alias mads-box protein agl42 0.02 Orthogroups_2024-Update
Brara.I03027.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
GRMZM2G129034 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G002330.8 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.011G075800 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Solyc05g015750 No alias SEPALLATA3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 19 66
No external refs found!