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  5. LOC_Os06g30940

LOC_Os06g30940


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0009451 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g30940
Cluster HCCA clusters: cluster_0021

Target Alias Description ECC score Gene Family Method Actions
A4A49_12895 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 522 569
IPR002885 Pentatricopeptide_repeat 381 432
IPR002885 Pentatricopeptide_repeat 219 248
IPR002885 Pentatricopeptide_repeat 495 518
IPR002885 Pentatricopeptide_repeat 118 147
IPR002885 Pentatricopeptide_repeat 90 115
IPR002885 Pentatricopeptide_repeat 191 217
No external refs found!