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  5. LOC_Os06g34560

LOC_Os06g34560


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g34560
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
172324 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Brara.F03530.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G051480.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G051510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
PSME_00040633-RA No alias (q40682|ef1d2_orysa : 94.4) Elongation factor 1-delta 2... 0.01 Orthogroups_2024-Update
Sobic.004G170300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc11g005290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 181 224
No external refs found!