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  5. LOC_Os06g35650

LOC_Os06g35650


Description : reticuline oxidase-like protein precursor, putative, expressed


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g35650
Cluster HCCA clusters: cluster_0111

Target Alias Description ECC score Gene Family Method Actions
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.02 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Brara.G00508.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I03596.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.01 Orthogroups_2024-Update
GRMZM2G348846 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.09G027300 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G091500.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
HORVU7Hr1G026630.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
LOC_Os06g35700 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g06180 No alias reticuline oxidase precursor, putative 0.04 Orthogroups_2024-Update
Potri.011G163000 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.019G063400 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.03 Orthogroups_2024-Update
Solyc10g054530 No alias FAD-binding Berberine family protein, putative (AHRD... 0.02 Orthogroups_2024-Update
Sopen02g025860 No alias FAD binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 460 520
IPR006094 Oxid_FAD_bind_N 77 215
No external refs found!