Description : 40S ribosomal protein S24, putative, expressed
Gene families : OG_42_0001483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001483_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os06g36160 | |
Cluster | HCCA clusters: cluster_0072 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
271584 | No alias | Ribosomal protein S24e family protein | 0.05 | Orthogroups_2024-Update | |
A4A49_64768 | No alias | 40s ribosomal protein s24-1 | 0.04 | Orthogroups_2024-Update | |
At3g04920 | No alias | 40S ribosomal protein S24-1... | 0.03 | Orthogroups_2024-Update | |
Bradi1g38010 | No alias | Ribosomal protein S24e family protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g08680 | No alias | Ribosomal protein S24e family protein | 0.04 | Orthogroups_2024-Update | |
Brara.E03413.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.I00438.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Cre10.g456200 | No alias | Ribosomal protein S24e family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.10G160300 | No alias | Ribosomal protein S24e family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.19G242700 | No alias | Ribosomal protein S24e family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G228100 | No alias | Ribosomal protein S24e family protein | 0.04 | Orthogroups_2024-Update | |
HORVU6Hr1G044840.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g52490 | No alias | 40S ribosomal protein S24, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_119841g0010 | No alias | (at3g04920 : 158.0) Ribosomal protein S24e family... | 0.03 | Orthogroups_2024-Update | |
PSME_00005358-RA | No alias | (at3g04920 : 189.0) Ribosomal protein S24e family... | 0.03 | Orthogroups_2024-Update | |
Potri.013G036100 | No alias | Ribosomal protein S24e family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s204_49V6 | No alias | 40s ribosomal protein | 0.05 | Orthogroups_2024-Update | |
Pp1s37_112V6 | No alias | 40s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s450_9V6 | No alias | 40s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Seita.5G301700.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.003G280700.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.004G099500.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.010G166100.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Solyc06g084230 | No alias | 40S ribosomal protein S24 (AHRD V3.3 *** K4CUG0_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Solyc09g065330 | No alias | 40S ribosomal protein S24 (AHRD V3.3 *** K4CAS8_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Sopen09g027090 | No alias | Ribosomal protein S24e | 0.04 | Orthogroups_2024-Update | |
evm.model.contig_2036.17 | No alias | (at3g04920 : 137.0) Ribosomal protein S24e family... | 0.06 | Orthogroups_2024-Update | |
evm.model.tig00000361.64 | No alias | (at3g04920 : 129.0) Ribosomal protein S24e family... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Predicted GO |
MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0017025 | TBP-class protein binding | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001976 | Ribosomal_S24e | 29 | 107 |
No external refs found! |