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  5. LOC_Os06g38490

LOC_Os06g38490


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g38490
Cluster HCCA clusters: cluster_0026

Target Alias Description ECC score Gene Family Method Actions
101476 No alias Leucine-rich repeat family protein 0.02 Orthogroups_2024-Update
120629 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
A4A49_07134 No alias putative lrr receptor-like serinethreonine-protein kinase 0.03 Orthogroups_2024-Update
At2g24130 No alias Leucine-rich receptor-like protein kinase family protein... 0.02 Orthogroups_2024-Update
At3g47110 No alias Putative receptor-like protein kinase At3g47110... 0.03 Orthogroups_2024-Update
Bradi4g16116 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g30827 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
GRMZM2G002569 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G041390.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G044140.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
LOC_Os02g42370 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_161530g0010 No alias (at1g34110 : 215.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_38414g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_8708888g0010 No alias (at1g25320 : 155.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00040101-RA No alias (at2g24130 : 273.0) Leucine-rich receptor-like protein... 0.02 Orthogroups_2024-Update
PSME_00043563-RA No alias (at5g46330 : 292.0) Encodes a leucine-rich repeat... 0.02 Orthogroups_2024-Update
PSME_00048257-RA No alias (at3g47570 : 560.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
PSME_00049305-RA No alias (at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative... 0.02 Orthogroups_2024-Update
Potri.005G080000 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Potri.013G133100 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Seita.8G118900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.8G122500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.003G069601.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Solyc02g068880 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc03g098400 No alias Receptor-kinase, putative (AHRD V3.3 *** B9SUC9_RICCO) 0.03 Orthogroups_2024-Update
Solyc08g075590 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen06g001860 No alias Protein kinase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 514 554
IPR000719 Prot_kinase_dom 659 888
No external refs found!