LOC_Os06g38510

Description : pectate lyase precursor, putative, expressed

Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os06g38510
Cluster	HCCA clusters: cluster_0019

Target	Alias	Description	ECC score	Gene Family Method
A4A49_24630	No alias	putative pectate lyase 3	0.03	Orthogroups_2024-Update
A4A49_35755	No alias	putative pectate lyase p59	0.02	Orthogroups_2024-Update
Pp1s173_162V6	No alias	pectate lyase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	None	Extended
MF	GO:0030570	pectate lyase activity	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002022	Pec_lyase	180	364
IPR007524	Pec_lyase_N	34	84

External Links

No external refs found!