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Description : pectate lyase family protein, expressed
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os06g38520 | |
| Cluster | HCCA clusters: cluster_0095 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_24630 | No alias | putative pectate lyase 3 | 0.03 | Orthogroups_2024-Update | |
| A4A49_40134 | No alias | putative pectate lyase p59 | 0.02 | Orthogroups_2024-Update | |
| At5g09280 | No alias | Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q9FY87] | 0.03 | Orthogroups_2024-Update | |
| Brara.B01305.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Brara.I00732.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G042700 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G126500 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G020200 | No alias | Pectate lyase family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.20G112600 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G002880.2 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| MA_10394547g0010 | No alias | (at4g22090 : 188.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
| MA_10437227g0020 | No alias | (at4g13710 : 576.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00041064-RA | No alias | (at1g67750 : 595.0) Pectate lyase family protein;... | 0.02 | Orthogroups_2024-Update | |
| Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.011G008100 | No alias | root hair specific 14 | 0.02 | Orthogroups_2024-Update | |
| Pp1s1_550V6 | No alias | Pectate lyase precursor (ZePel) [Zinnia elegans] | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G322800.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
| Solyc02g087670 | No alias | Pectate lyase (AHRD V3.3 *** K4BBS3_SOLLC) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |