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  5. LOC_Os06g40490

LOC_Os06g40490


Description : glycosyl hydrolases family 17, putative, expressed


Gene families : OG_42_0000462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os06g40490
Cluster HCCA clusters: cluster_0059

Target Alias Description ECC score Gene Family Method Actions
Bradi3g07385 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Brara.G01316.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Glyma.12G185200 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G063240.5 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
MA_118893g0010 No alias (at3g15800 : 313.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
MA_21822g0010 No alias (at1g32860 : 351.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
MA_5603g0010 No alias (at1g30080 : 369.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
MA_98924g0010 No alias (at1g32860 : 312.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Solyc02g070450 No alias Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g055840 No alias Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen07g004020 No alias Glycosyl hydrolases family 17 0.03 Orthogroups_2024-Update
Sopen12g024330 No alias Glycosyl hydrolases family 17 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 72 388
No external refs found!