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  5. LOC_Os06g40550

LOC_Os06g40550


Description : ABC-2 type transporter domain containing protein, expressed


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g40550
Cluster HCCA clusters: cluster_0135

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G076900 No alias ATP-binding cassette 14 0.02 Orthogroups_2024-Update
Kfl00003_0100 kfl00003_0100_v1.1 (at1g31770 : 406.0) ATP-binding cassette 14 (ABCG14);... 0.02 Orthogroups_2024-Update
MA_18507g0010 No alias (at1g31770 : 751.0) ATP-binding cassette 14 (ABCG14);... 0.03 Orthogroups_2024-Update
Potri.006G199500 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Sobic.010G187400.1 No alias sporopollenin precursor exporter *(ABCG26) & subfamily... 0.02 Orthogroups_2024-Update
Solyc07g065770 No alias ABC transporter family protein (AHRD V3.3 *-* B9GG01_POPTR) 0.04 Orthogroups_2024-Update
Solyc12g013630 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9Q0M2_ZOSMR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 417 626
IPR003439 ABC_transporter-like 92 242
No external refs found!