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  5. LOC_Os06g42720

LOC_Os06g42720


Description : amino acid transporter, putative, expressed


Gene families : OG_42_0000560 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g42720
Cluster HCCA clusters: cluster_0041

Target Alias Description ECC score Gene Family Method Actions
164943 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
At2g40420 No alias Amino acid transporter AVT6D... 0.02 Orthogroups_2024-Update
Brara.B03402.1 No alias solute transporter *(AAAP) 0.03 Orthogroups_2024-Update
Brara.G02037.1 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update
Brara.H00416.1 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update
Brara.I00355.1 No alias solute transporter *(AAAP) 0.03 Orthogroups_2024-Update
GRMZM2G177659 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Glyma.02G260100 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Glyma.18G022400 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G045630.2 No alias solute transporter *(AAAP) 0.03 Orthogroups_2024-Update
LOC_Os02g09810 No alias amino acid transporter, putative, expressed 0.03 Orthogroups_2024-Update
Potri.002G114300 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Potri.008G075500 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Pp1s300_58V6 No alias amino acid transporter 0.02 Orthogroups_2024-Update
Seita.2G153500.1 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update
Seita.4G201100.1 No alias solute transporter *(AAAP) 0.03 Orthogroups_2024-Update
Seita.4G208000.1 No alias solute transporter *(AAAP) 0.03 Orthogroups_2024-Update
Sobic.010G199200.1 No alias solute transporter *(AAAP) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 42 415
No external refs found!