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  5. LOC_Os06g43570

LOC_Os06g43570


Description : peptidase, T1 family, putative, expressed


Gene families : OG_42_0002994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g43570
Cluster HCCA clusters: cluster_0047

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_575.4 No alias (q9lst7|psb3_orysa : 259.0) Proteasome subunit beta type... 0.02 Orthogroups_2024-Update
evm.model.tig00000826.22 No alias (q9lst7|psb3_orysa : 263.0) Proteasome subunit beta type... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005839 proteasome core complex IEA InterProScan predictions
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 120 296
No external refs found!