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LOC_Os06g44460


Description : D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed


Gene families : OG_42_0001120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g44460
Cluster HCCA clusters: cluster_0118

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G073814 No alias D-3-phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update
GRMZM2G098423 No alias D-3-phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update
Potri.010G249600 No alias D-3-phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA InterProScan predictions
MF GO:0051287 NAD binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006139 D-isomer_2_OHA_DH_cat_dom 74 383
IPR002912 ACT_dom 542 602
IPR006140 D-isomer_DH_NAD-bd 176 351
No external refs found!