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  5. Solyc08g043150

Solyc08g043150


No description available


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g043150
Cluster HCCA clusters: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g10460 No alias retrotransposon protein, putative, Ty3-gypsy subclass, expressed 0.02 Orthogroups_2024-Update
PSME_00024374-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
Solyc08g044450 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g012010 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g052430 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g019380 No alias No description available 0.03 Orthogroups_2024-Update
Sopen00g001810 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen00g009040 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen01g012600 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen01g012860 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen01g026660 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen02g012390 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen04g020280 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen04g030350 No alias Rhamnogalacturonate lyase family 0.02 Orthogroups_2024-Update
Sopen05g023200 No alias Retroviral aspartyl protease 0.03 Orthogroups_2024-Update
Sopen05g026240 No alias Retroviral aspartyl protease 0.03 Orthogroups_2024-Update
Sopen06g014260 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen06g016840 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen07g005780 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen07g015680 No alias Retroviral aspartyl protease 0.03 Orthogroups_2024-Update
Sopen07g021480 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen09g025530 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen11g009960 No alias Retrotransposon gag protein 0.02 Orthogroups_2024-Update
Sopen11g019830 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen11g021290 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen11g023740 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen12g011740 No alias Integrase core domain 0.02 Orthogroups_2024-Update
Sopen12g011860 No alias Retroviral aspartyl protease 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!