Description : OsMADS30 - MADS-box family gene with MIKCc type-box, expressed
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os06g45650 | |
Cluster | HCCA clusters: cluster_0003 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_20769 | No alias | agamous-like mads-box protein agl15 | 0.02 | Orthogroups_2024-Update | |
Bradi2g24940 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Bradi2g30530 | No alias | AGAMOUS-like 23 | 0.03 | Orthogroups_2024-Update | |
Bradi4g39420 | No alias | AGAMOUS-like 62 | 0.03 | Orthogroups_2024-Update | |
Glyma.08G282500 | No alias | AGAMOUS-like 29 | 0.03 | Orthogroups_2024-Update | |
Glyma.14G027251 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G088600 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
MA_458668g0010 | No alias | (at2g45660 : 100.0) Controls flowering and is required... | 0.03 | Orthogroups_2024-Update | |
Potri.006G048700 | No alias | AGAMOUS-like 18 | 0.02 | Orthogroups_2024-Update | |
Seita.9G561000.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.001G086500.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | Predicted GO |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Predicted GO |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0031248 | protein acetyltransferase complex | IEP | Predicted GO |
MF | GO:0051499 | D-aminoacyl-tRNA deacylase activity | IEP | Predicted GO |
CC | GO:0070461 | SAGA-type complex | IEP | Predicted GO |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
CC | GO:1902493 | acetyltransferase complex | IEP | Predicted GO |
No external refs found! |