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  5. LOC_Os06g48290

LOC_Os06g48290


Description : homeobox associated leucine zipper, putative, expressed


Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g48290
Cluster HCCA clusters: cluster_0139

Target Alias Description ECC score Gene Family Method Actions
A4A49_01064 No alias homeobox-leucine zipper protein hat22 0.02 Orthogroups_2024-Update
Brara.B03044.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G082910.2 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G049790.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G098230.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g46350 No alias homeobox associated leucine zipper, putative, expressed 0.02 Orthogroups_2024-Update
MA_60457g0010 No alias (at5g06710 : 208.0) Homeobox-leucine zipper protein.;... 0.02 Orthogroups_2024-Update
Potri.010G112600 No alias homeobox-leucine zipper protein 17 0.02 Orthogroups_2024-Update
Pp1s41_32V6 No alias homeobox-leucine zipper protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 170 202
IPR001356 Homeobox_dom 114 168
No external refs found!