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  5. LOC_Os06g49240

LOC_Os06g49240


Description : PTR-like peptide transporter, putatuve, expressed


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g49240
Cluster HCCA clusters: cluster_0132

Target Alias Description ECC score Gene Family Method Actions
A4A49_28129 No alias protein nrt1 ptr family 5.7 0.02 Orthogroups_2024-Update
A4A49_37441 No alias protein nrt1 ptr family 6.3 0.02 Orthogroups_2024-Update
At1g22550 No alias Protein NRT1/ PTR FAMILY 5.16... 0.03 Orthogroups_2024-Update
At5g46050 No alias Protein NRT1/ PTR FAMILY 5.2... 0.03 Orthogroups_2024-Update
GRMZM2G176253 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G400602 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G136400 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Glyma.08G361300 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G034000 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G114260.5 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
HORVU7Hr1G106160.2 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Kfl00057_0100 kfl00057_0100_v1.... (at5g01180 : 590.0) Encodes a dipeptide transporter... 0.01 Orthogroups_2024-Update
MA_10437216g0010 No alias (at3g54450 : 486.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Pp1s173_71V6 No alias peptide transport-like protein 0.02 Orthogroups_2024-Update
Pp1s298_45V6 No alias nitrate transporter 0.02 Orthogroups_2024-Update
Sobic.001G282100.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.001G443900.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.001G511000.2 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 21 402
No external refs found!