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  5. LOC_Os06g51060

LOC_Os06g51060


Description : CHIT8 - Chitinase family protein precursor, expressed


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g51060
Cluster HCCA clusters: cluster_0141

Target Alias Description ECC score Gene Family Method Actions
443112 No alias basic chitinase 0.03 Orthogroups_2024-Update
446851 No alias basic chitinase 0.04 Orthogroups_2024-Update
Bradi2g47210 No alias basic chitinase 0.03 Orthogroups_2024-Update
Brara.C03413.1 No alias basic chitinase *(CHIB) 0.03 Orthogroups_2024-Update
LOC_Os05g33150 No alias CHIT6 - Chitinase family protein precursor, expressed 0.03 Orthogroups_2024-Update
Mp2g24440.1 No alias Endochitinase CH25 OS=Brassica napus... 0.03 Orthogroups_2024-Update
Mp4g20450.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.02 Orthogroups_2024-Update
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Orthogroups_2024-Update
PSME_00012567-RA No alias (p51613|chib_vitvi : 374.0) Basic endochitinase... 0.04 Orthogroups_2024-Update
PSME_00012569-RA No alias (p17514|chiq_tobac : 260.0) Acidic endochitinase Q... 0.03 Orthogroups_2024-Update
PSME_00050349-RA No alias (p52403|chi1_soltu : 337.0) Endochitinase 1 precursor... 0.03 Orthogroups_2024-Update
Potri.009G142000 No alias basic chitinase 0.02 Orthogroups_2024-Update
Seita.4G286000.1 No alias basic chitinase *(CHIB) 0.03 Orthogroups_2024-Update
Solyc10g055780 No alias Endochitinase (Chitinase) (AHRD V3.3 *** Q43184_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 48 85
IPR000726 Glyco_hydro_19_cat 108 341
No external refs found!