LOC_Os06g51130

Description : spotted leaf 11, putative, expressed

Gene families : OG_42_0000634 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000634_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os06g51130
Cluster	HCCA clusters: cluster_0107

Target	Alias	Description	ECC score	Gene Family Method
At2g28830	No alias	PLANT U-BOX 12 [Source:TAIR;Acc:AT2G28830]	0.02	Orthogroups_2024-Update
Bradi1g29870	No alias	Plant U-Box 15	0.03	Orthogroups_2024-Update
Glyma.07G216200	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G009900	No alias	Plant U-Box 15	0.02	Orthogroups_2024-Update
Seita.3G327700.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Solyc04g082440	No alias	U-box domain-containing 15-like protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen04g002720	No alias	Armadillo/beta-catenin-like repeat	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	260	324
IPR000225	Armadillo	456	493

External Links

No external refs found!