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  5. LOC_Os06g51250

LOC_Os06g51250


Description : EF hand family protein, putative, expressed


Gene families : OG_42_0001824 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001824_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g51250
Cluster HCCA clusters: cluster_0087

Target Alias Description ECC score Gene Family Method Actions
Bradi1g29690 No alias Calcium-binding EF hand family protein 0.03 Orthogroups_2024-Update
Bradi1g76400 No alias Calcium-binding EF hand family protein 0.04 Orthogroups_2024-Update
Glyma.02G311333 No alias Calcium-binding EF hand family protein 0.03 Orthogroups_2024-Update
Glyma.04G016600 No alias Calcium-binding EF hand family protein 0.03 Orthogroups_2024-Update
Glyma.06G016700 No alias Calcium-binding EF hand family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G121230.4 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex 0.03 Orthogroups_2024-Update
Kfl00218_0010 kfl00218_0010_v1.1 (at1g21630 : 119.0) Calcium-binding EF hand family... 0.02 Orthogroups_2024-Update
Kfl00218_0020 kfl00218_0020_v1.1 (at1g21630 : 149.0) Calcium-binding EF hand family... 0.02 Orthogroups_2024-Update
PSME_00028035-RA No alias (at1g20760 : 553.0) Calcium-binding EF hand family... 0.03 Orthogroups_2024-Update
Potri.005G253000 No alias Calcium-binding EF hand family protein 0.03 Orthogroups_2024-Update
Pp1s149_18V6 No alias calcium ion binding 0.02 Orthogroups_2024-Update
Sobic.010G275500.1 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR000261 EH_dom 374 459
IPR002048 EF_hand_dom 6 24
No external refs found!